Past hosted lectures
2024/2025 | ||
6. 11. 2024 | Hana Rozhoňová (Charlese University) | The genetic code and protein evolvability |
2023/2024 | ||
14. 5. 2024 | Tom Williams (University of Bristol) | Phylogenomics and the early evolution of life |
24. 4. 2024 | Jan Řezáč (IOCB, Prague) | Semiempirical Quantum Mechanical Scoring in Structure-based Drug Design |
17. 4. 2024 | Geoff Barton (University of Dundee) | From human population variation to ligand binding sites via SARS-CoV-2 |
10. 4. 2024 | Karolína Korvasová (MFF UK) | Computational methods for prosthetic vision: inferring functional structure of the brain from its spontaneous activity |
3. 4. 2024 | Lukáš Valihrach (IBT, BioCev) | Revolutionizing Modern Biomedical Research with Single-Cell and Spatial Transcriptomics |
20. 3. 2024 | Bailey Francis (Sanger) | A Telomere-to-Telomere (T2T) Mouse Genome Assembly: Towards the first complete mouse genome |
5. 3. 2024 | Hana Rozhoňová (ETH Zurich) | A computational screen for alternative genetic codes in viruses |
20. 12. 2023 | Karel Brinda (INRIA) | Efficient Search of Microbial Genomes via Phylogenetic Compression |
12. 12. 2023 | Rafael Najmanovich (University of Montreal) | Probing the dynamics of macromolecules and energetics of molecular interactions with high-performance, fast and accessible computational methods |
22. 11. 2023 | Jana Musilová (Brno University of Technology) | Augusta, a Python package for inferring Gene Regulatory and Boolean Networks using RNA-Seq and data mining |
25. 10. 2023 | Lenka Gahurová (University of South Bohemia) | (Un)usual characteristics of African mole-rats' oocytes and sex chromosomes through genomics and transcriptomics approaches |
18. 10. 2023 | Tomáš Pluskal, Ela Nekardová, Lukáš Valihrach, Jiří Lindovský, David Hoksza | Projects opportunities |
11. 10. 2023 | Michal Kolář, Jan Stuchlý, Jan Antolík, Martin Modrák, Marian Novotný | Projects opportunities |
2022/2023 | ||
10. 5. 2023 | Carl Hermann (University of Heidelberg) | Machine learning approaches for the identification of disease signatures |
2. 5. 2023 | Erich Bornberg-Bauer (University of Muenster) | Lost (and found) in translation: How evolution can find functional proteins in vast sequence space |
19. 4. 2023 | Kateřina Storchmannova (Palacký University Olomouc) | MolMeDB - databáze interakcí malých molekul s membránami a membránovými transportními proteiny |
12. 4. 2023 | Discussion - Ten simple rules for defining a computational biology project | |
5. 4. 2023 | Lenka Backová (UPV/EHU) | Bioimaging |
29. 3. 2023 | Ondřej Sladký (Faculty of Mathematics and Physics, Charles University) | Masked superstrings as a unified framework for textual k-mer set representations |
22. 3. 2023 | Marek Ostaszewski (Luxembourg Centre for Systems Biomedicine) | Disease maps: building and analysing graphical models of biomedical knowledge |
8. 3. 2023 | Joern Gerchen (Faculty of Science, Charles University) | Building complex bioinformatics pipelines using Snakemake |
7. 12. 2022 | Victoria Offord (WSI) | Functionalizing the cancer genome base-by-base with CRISPR editing and computational tools |
23. 11. 2022 | Mihaly Varadi (EMBL-EBI) | AlphaFold DB: Increasing the structure coverage of the sequence space by a thousand times |
19. 10. 2022 | Tomáš Sieger (compNeuroGroup, ČVUT) | Measures of quality of clusters in hierarchical clustering of flow cytometry data |
2021/2022 | ||
19. 10. 2022 | Tomáš Sieger | Measures of quality of clusters in hierarchical clustering of flow cytometry data |
4. 5. 2022 | Alessandra Carbone | Sequence space and protein functional classification |
30. 3. 2022 | Giulio Vistoli | Novel strategies for virtual screening and drug repurposing: the lesson learned from the SARS-CoV-2 pandemy |
23. 2. 2022 | Eugene Gardner | Investigating the Genetics of Sexual Reproduction in 200,000 Humans |
24. 11. 2021 | Abdullah Kahraman | MTPpilot: an interactive software for NGS results analysis for molecular tumor boards |
12. 10. 2021 | Augustin Žídek | Deepmind: Protein Structure Prediction with AlphaFold |
2018 | ||
23.5.2018 | Esteban Jenkins | Long read mapping algorithms |
Isidora Conic | Bioinformatics and Cancer | |
9.5.2018 | Marc Haber | History of the Near East from Ancient and Present-day Genome Sequences |
11.4.2018 | Viorica Chelban | Disease discovery in neurogenetics: from patient to pathways and therapies |
28.3.2018 | Marian Novotný | Fosforylace proteinů - bioinformatický pohled |
7.3.2018 | Jan Pačes | Artificial life |
3.1.2018 | David Nohejl | Variant Effect Prediction |
2017 | ||
20.12.2017 | Tomáš Gavenčiak | Genotype refinement with PBWT |
6.12.2017 | Audrey Lin | Rates of evolutionary change in ancient domesticated animals |
22.11.2017 | Andrew Page | High throughput pathogen informatics |
1.11.2017 | Martin Modrák | Genexpi: Discovering Regulatory Interactions on the GPU |
18.10.2017 | David Dufour Rausell | A brief overview of Structural Bioinformatics: from proteins to chromosomes |
3.5.2017 | Karel Sedlář | Vizualizace v metagenomice |
19.4.2017 | Tereza Tolarová | Aktivace embryonálního genomu v preimplantačním vývoji savců |
5.4.2017 | Daniel Morais | You can change the knowledge about the microbial universe |
22.3.2017 | Matěj Lexa | pqsfinder: flexible detection of sequences forming G-quadruplexes in R/Bioconductor |
8.3.2017 | Lukáš Hrbek | Variant calling with deep neural networks |
11.1.2017 | Jiří Vohradský | Modeling and simulation of lambda-phage genetic network |
4.1 | Ashkan Zareie Victor Santiago | Drug-Target Interaction Prediction Variant Calling |
2016 | ||
14.12 | Jiří Macas | Repetitivní DNA: "Temná hmota" genomu a její výzkum pomocí teorie grafů |
30.11 | Milan Malinský | Bioinformatické metody v evoluční genomice |
16.11 | Michal Kolář | Evoluce zachycená v (proteinové) síti |
2.11 | Holly Z. Bradley | The 1000 Genomes Project, what is it and can it help my research? |
19.10 | Jan Kalina | Statistické klasifikační metody při celogenomové analýze genových expresí |
5.10 | Jan Brezovský | Identifikace aktivních malých molekul pro biotechnologie |
18.5 | Matej Pribis | Copy Number Variation |
11.5 | Erik Garrison | Genome variation graphs and genotyping by tera-scale learning |
4.5 | Karel Jalovec | Discriminatory analysis of sequenced read-sets |
27.4 | Radka Reifová | Populační a speciační genomika: hledání genetické podstaty vzniku druhů na modelu dvou druhů slavíků. |
20.4 | Stephan Schiffels | How genomes help us understand human history |
13.4 | Petr Daněček | Základní úloha bioinformatiky: Alignment and Mapping |
5.4 | Jan Pačes | Genom šimpanze, genom člověka |
16.3 | David Hoksza | Procházky chemickým prostorem |
9.3 | Martin Loebl | DNA repeats and information concealing |
2.3 | Daniel Svozil | Je DNA struktura nudná? |
2015 | ||
16.12 | Petr Maršálek | Vědomí a jeho poruchy, pokus o objektivní popis |
9.12 | P. Pančoška, J. Nešetřil | Matematika struktur pro informatiku personalizované medicíny |
2.12 | Petr Daněček | Copy Number Variation and HMM |
25.11 | Viktor Stránecký | Next Generation Sequencing |
18.11 | Karel Fišer | Leukémie s přesmykem |
11.11 | Tomáš Sieger | Počítejte (s) neurony! |
4.11 | David Hoksza | Identifikace strukturní podobnosti RNA molekul |
19.10 | Jan Holub | Burrows-Wheelerova transformace v bioinformatice |
12.10 | Jan Pačes | Analýza Endogenních Retrovirů |